kmc_dump - list k-mers from kmc-generated database
Contents
Copying
KMC is a free software distributed under GNU GPL3 licence for academic, research, and commercial use.
KMC dump ver. 3.2.4 (2024-02-09) February 2024 KMC_DUMP(1)
Description
KMC's end product is a database of k-mers stored in compact binary form. The kmc_dump program allows the
production of a textual list of k-mers together with their counters for the analysis ran
Name
kmc_dump - list k-mers from kmc-generated database
Options
-ci<value> - exclude k-mers occurring less than <value> times
-cx<value> - exclude k-mers occurring more of than <value> times
Parameters:
<kmc_database> - kmer_counter's output
Synopsis
kmc_dump [options] <kmc_database> <output_file>
