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kmc_dump - list k-mers from kmc-generated database

Author

       kmc_dump was originally written by:

       Sebastian Deorowicz (sebastian.deorowicz@polsl.pl)

       Marek Kokot

       Szymon Grabowski

       Agnieszka Debudaj-Grabysz

Copying

       KMC is a free software distributed under GNU GPL3 licence for academic, research, and commercial use.

KMC dump ver. 3.2.4 (2024-02-09)                  February 2024                                      KMC_DUMP(1)

Description

       KMC's  end product is a database of k-mers stored in compact binary form. The kmc_dump program allows the
       production of a textual list of k-mers together with their counters for the analysis ran

Name

       kmc_dump - list k-mers from kmc-generated database

Options

-ci<value> - exclude k-mers occurring less than <value> times

       -cx<value> - exclude k-mers occurring more of than <value> times

       Parameters:

       <kmc_database> - kmer_counter's output

Synopsis

       kmc_dump [options] <kmc_database> <output_file>

See Also