kmc_tools-kmers_subtract - calculate subtraction of two KMC databases

       KMC was originally written by:

       •   Sebastian Deorowicz (sebastian.deorowicz@polsl.pl)

       •   Marek Kokot

       •   Szymon Grabowski

       •   Agnieszka Debudaj-Grabysz

       KMC is a free software distributed under GNU GPL3 licence for academic, research, and commercial use.

                                                                                     KMC_TOOLS-KMERS_SUBTRACT(1)

       The output database will contains only k-mers that are present in the first input set but absent in the
       second one. The counter value is equal to the value from the first input set.

           kmc -k28 file1.fastq kmers1 tmp
           kmc -k28 file2.fastq kmers2 tmp
           kmc_tools kmers_subtract kmers1 kmers2 kmers1_kmers2_subtract -cs200

       kmc_tools-kmers_subtract - calculate subtraction of two KMC databases

       For each input there are additional parameters:

       -ci<value>
           exclude k-mers occurring less than <value> times

       -cx<value>
           exclude k-mers occurring more of than <value> times

       For output there are additional parameters:

       -ci<value>
           exclude k-mers occurring less than <value> times

       -cx<value>
           exclude k-mers occurring more of than <value> times

       -cs<value>
           maximal value of a counter

kmc_toolskmers_subtract <input1 [input1_params]> <input2 [input2_params]> <output [output_params]>