mapMers - report statistics of mapping kmers to sequences
Contents
Name
mapMers - report statistics of mapping kmers to sequences
Options
-stats reports the mean, minimum, and maximum for each sequence, along with a log2 histogram of the
counts
-regions
reports regions with kmer coverage
-details
reports the forward and reverse count in the database for each kmer in the sequence
-mmersize-mersmers
the meryl(1) database
-seqfasta
input sequence file
See Also
meryl(1), mapMers-depth(1) mapMers 0~20150520+2004 May 2015 MAPMERS(1)
Synopsis
mapMers {-stats|-regions|-details} -mmersize-mersmers-seqfasta