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mapMers - report statistics of mapping kmers to sequences

Name

       mapMers - report statistics of mapping kmers to sequences

Options

-stats reports  the  mean,  minimum,  and  maximum  for each sequence, along with a log2 histogram of the
              counts

       -regions
              reports regions with kmer coverage

       -details
              reports the forward and reverse count in the database for each kmer in the sequence

       -mmersize-mersmers
              the meryl(1) database

       -seqfasta
              input sequence file

See Also

meryl(1), mapMers-depth(1)

mapMers 0~20150520+2004                             May 2015                                          MAPMERS(1)

Synopsis

mapMers {-stats|-regions|-details} -mmersize-mersmers-seqfasta

See Also