marscan - Finds matrix/scaffold recognition (MRS) signatures in DNA sequences

DebianMedPackagingTeam <debian-med-packaging@lists.alioth.debian.org>
           Wrote the script used to autogenerate this manual page.

       Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to
       the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

       This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be
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EMBOSS 6.4.0                                       05/11/2012                                        MARSCAN(1e)

marscan is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It
       is part of the "Nucleic:Gene finding,Nucleic:Functional sites,Nucleic:Transcription" command group(s).

       marscan - Finds matrix/scaffold recognition (MRS) signatures in DNA sequences

Inputsection-sequenceseqallOutputsection-outfilereport
           File for output of MAR/SAR recognition signature (MRS) regions. This contains details of the MRS in
           normal GFF format. The MRS consists of two recognition sites, one of 8 bp and one of 16 bp on either
           sense strand of the genomic DNA, within 200 bp of each other.

       marscan is fully documented via the tfm(1) system.

marscan-sequenceseqall-outfilereportmarscan-help