mauveAlignment2anchors - converts a Mauve alignment into Murasaki anchor format based on gapped alignment

       mauveAlignment2anchors - converts a Mauve alignment into Murasaki anchor format based on gapped alignment
       data (each gap triggers a new anchor). Note this refers to the Mauve alignment format, not the LAGAN
       .alignment file that Mauve also outputs.

         --autoout -- create output file name automatically (on by default)
         --noautoout -- disable the above "autoout" option

perl v5.40.0                                       2024-11-30                          MAUVEALIGNMENT2ANCHORS(1)

       mauveAlignment2anchors <input> [output]