newcoils - Predicts coils protein secondary structure
Contents
Bugs
Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to
the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).
Copyright
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be
redistributed under the same terms as EMBOSS itself.
EMBOSS 6.4.0 05/11/2012 NEWCOILS(1e)
Description
newcoils is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It
is part of the "Protein:2D Structure" command group(s).
Name
newcoils - Predicts coils protein secondary structure
Options
Inputsection-sequenceseqall-datafiledatafile
Default value: Enewcoils.mat
Requiredsection-windowinteger
Default value: 21
-weightedinteger-verbinteger-modeinteger-minseginteger
Default value: 1
-minpfloat
Default value: 0.50
Outputsection-outfileoutfileSee Also
newcoils is fully documented via the tfm(1) system.
Synopsis
newcoils-sequenceseqall-datafiledatafile-windowinteger-weightedinteger-verbinteger-modeinteger-minseginteger-minpfloat-outfileoutfilenewcoils-help
