palindrome - Finds inverted repeats in nucleotide sequence(s)
Contents
Bugs
Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to
the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).
Copyright
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be
redistributed under the same terms as EMBOSS itself.
EMBOSS 6.4.0 05/11/2012 PALINDROME(1e)
Description
palindrome is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”).
It is part of the "Nucleic:Repeats" command group(s).
Name
palindrome - Finds inverted repeats in nucleotide sequence(s)
Options
Inputsection-sequenceseqallRequiredsection-minpalleninteger
Default value: 10
-maxpalleninteger
Default value: 100
-gaplimitinteger
Default value: 100
-nummismatchesintegerOutputsection-outfileoutfile-overlapboolean
Default value: Y
See Also
palindrome is fully documented via the tfm(1) system.
Synopsis
palindrome-sequenceseqall-minpalleninteger-maxpalleninteger-gaplimitinteger-nummismatchesinteger-outfileoutfile-overlapbooleanpalindrome-help
