pepwheel - Draw a helical wheel diagram for a protein sequence

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       Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to
       the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

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EMBOSS 6.4.0                                       05/11/2012                                       PEPWHEEL(1e)

pepwheel is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It
       is part of the "Display,Protein:2D Structure" command group(s).

       pepwheel - Draw a helical wheel diagram for a protein sequence

Inputsection-sequencesequenceOutputsection-wheelboolean
           Default value: Y

       -stepsinteger
           The number of residues plotted per turn is this value divided by the 'turns' value. Default value: 18

       -turnsinteger
           The number of residues plotted per turn is the 'steps' value divided by this value. Default value: 5

       -graphgraphMarkupsection-amphipathictoggle
           If this is true then the residues ACFGILMVWY are marked as squares and all other residues are
           unmarked. This overrides any other markup that you may have specified using the qualifiers
           '-squares', '-diamonds' and '-octags'.

       -squaresstring
           By default the aliphatic residues ILVM are marked with squares. Default value: ILVM

       -diamondsstring
           By default the residues DENQST are marked with diamonds. Default value: DENQST

       -octagsstring
           By default the positively charged residues HKR are marked with octagons. Default value: HKR

       pepwheel is fully documented via the tfm(1) system.

pepwheel-sequencesequence-wheelboolean [-stepsinteger] [-turnsinteger] -graphgraph-amphipathictoggle-squaresstring-diamondsstring-octagsstringpepwheel-help