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PicardCommandLine - manipulate SAM and BAM files

Description

       SAM (Sequence Alignment/Map) format is a generic format for storing large nucleotide sequence alignments.

       Picard  Tools  includes  lots  of utilities to manipulate SAM and BAM files.  The whole list with a short
       description can be obtained by running PicardCommandLine-h.

       Description of the options and parameters of all commands can be obtained  by  running  PicardCommandLineCOMMAND-h.

Name

       PicardCommandLine - manipulate SAM and BAM files

Reporting Bugs

See Also

http://broadinstitute.github.io/picard/

picard-tools 1.138                               September 2015                             PicardCommandLine(1)

Synopsis

PicardCommandLineCOMMAND [OPTION]...

See Also