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probe - Probe image data.

Acknowledgments

       CMTK  is  developed  with support from the NIAAA under Grant AA021697, National Consortium on Alcohol and
       Neurodevelopment in Adolescence (N-CANDA): Data Integration Component. From April 2009 through  September
       2011, CMTK development and maintenance was supported by the NIBIB under Grant EB008381.

CMTK 3.3.1p2                                       Feb 26 2025                                          probe(1)

Authors

       Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R.  Maurer,  Daniel  B.
       Russakoff, and Yaroslav Halchenko

Bugs

Description

       This tool prints pixel values or symbolic labels at a list of user-provided image coordinates.

License

Name

       probe - Probe image data.

Options

GlobalToolkitOptions(thesearesharedbyallCMTKtools)--help
            Write list of basic command line options to standard output.

       --help-all
            Write complete list of basic and advanced command line options to standard output.

       --wiki
            Write list of command line options to standard output in MediaWiki markup.

       --man
            Write man page source in 'nroff' markup to standard output.

       --version
            Write toolkit version to standard output.

       --echo
            Write the current command line to standard output.

       --verbose-level<integer>
            Set verbosity level.

       --verbose, -v
            Increment verbosity level by 1 (deprecated; supported for backward compatibility).

       --threads<integer>
            Set maximum number of parallel threads (for POSIX threads and OpenMP).

   MainOptions--coordinates
            Coordinate  specification  mode.   Supported  values: "absolute", "indexed", "relative", "physical",
            where the default is "absolute", or use one of the following:

            --absolute
                 Use absolute volume coordinates. For each dimension, the valid range is [0,FOV].  [Thisisthedefault]--indexed
                 Use  grid  indexes  to  specify  coordinates.  For  each  dimension,  the  valid value range is
                 [0,Dims-1].

            --relative
                 Use relative volume coordinates. For each dimension, the valid range is [0,1].

            --physical
                 Use physical volume coordinates. Each given location is transformed into image coordinates  via
                 the inverse of the images's index-to-physical space matrix.

       --interpolation
            Image  interpolation method.  Supported values: "nn", "linear", "cubic", "pv", "sinc-cosine", "sinc-
            hamming", where the default is "nn", or use one of the following:

            --nn Nearest neighbor interpolation [Thisisthedefault]--linear
                 Trilinear interpolation

            --cubic
                 Tricubic interpolation

            --pv Partial volume interpolation

            --sinc-cosine
                 Sinc interpolation with cosine window

            --sinc-hamming
                 Sinc interpolation with Hamming window

       --sinc-window-radius<integer>
            Window radius for Sinc interpolation [Default:3]--no-reorient
            Disable image reorientation into RAS alignment.

Synopsis

probe InputImage

See Also