SplitSeq.py - Sorts, samples and splits FASTA/FASTQ sequence files

        This manpage was written by Andreas Tille for the Debian distribution and
        can be used for any other usage of the program.

SplitSeq.py 0.6.0                                   May 2020                                      SPLITSEQ.PY(1)

       usage: SplitSeq.py [--version] [-h]  ...

       Sorts, samples and splits FASTA/FASTQ sequence files

   help:--version
              show program's version number and exit

       -h, --help
              show this help message and exit

   subcommands:
              Sequence file operation

       count  Splits sequences files by number of records.

       group  Splits sequences files by annotation.

       sample Randomly samples from unpaired sequences files.

              samplepair

              Randomly samples from paired-end sequences files.

       sort   Sorts sequences files by annotation.

       select Selects sequences from sequence files by annotation.

   outputfiles:
              part<part>

              reads partitioned by count, where <part> is the partition number.

              <field>-<value>

              reads partitioned by annotation <field> and <value>.

              under-<number>

              reads  partitioned  by  numeric  threshold  where  the  annotation value is strictly less than the
              threshold <number>.

              atleast-<number>

              reads partitioned by numeric threshold where the annotation value is greater than or equal to  the
              threshold <number>.

              sorted

              reads sorted by annotation value.

              sorted-part<part>

              reads sorted by annotation value and partitioned by count, where <part> is the partition number.

              sample<i>-n<count>

              randomly  sampled  reads where <i> is a number specifying the sampling instance and <count> is the
              number of sampled reads.

              selected

              reads passing selection criteria.

   outputannotationfields:
              None

       SplitSeq.py - Sorts, samples and splits FASTA/FASTQ sequence files