logo
Free, Micro AI Code Reviews That Run on Git Commit
git-lrc git-lrc GitHub Install Now We'd appreciate a star git-lrc - Free, Micro AI Code Reviews That Run on Git Commit | Product Hunt git-lrc - Free, Micro AI Code Reviews That Run on Git Commit | Product Hunt

tradis_gene_insert_sites - Generate insertion site details from TraDIS pipeline plots

Author

       Carla Cummins <path-help@sanger.ac.uk>

Contact

path-help@sanger.ac.uk Original author: Lars Barquist

Description

       This script is for TRADIS analysis. It takes in a plot file created by the TRADIS pathogen informatics
       pipeline, and an embl file of annotation.  It then outputs a tab delimited file with the insert site
       details. This is then used as input to an R script to calculate essentialit y.

Methods

Name

       tradis_gene_insert_sites.pl

Synopsis

Version

       version 1.4.5

See Also