tradis_gene_insert_sites - Generate insertion site details from TraDIS pipeline plots
Contents
Contact
path-help@sanger.ac.uk Original author: Lars Barquist
Copyright And License
This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.
This is free software, licensed under:
The GNU General Public License, Version 3, June 2007
perl v5.38.2 2024-01-25 TRADIS_GENE_INSERT_SITES(1p)
Description
This script is for TRADIS analysis. It takes in a plot file created by the TRADIS pathogen informatics
pipeline, and an embl file of annotation. It then outputs a tab delimited file with the insert site
details. This is then used as input to an R script to calculate essentialit y.
Methods
Name
tradis_gene_insert_sites.pl
Synopsis
Version
version 1.4.5
