transformseq - convert multiple sequence alignments from one format to another

              A tool for converting multiple sequence alignments from one format to

       another.

       transformseq - convert multiple sequence alignments from one format to another

--version
              show program's version number and exit

       -h--help
              show this help message and exit

              Input/Output Options:

       -f--fin FILENAME
              Sequence input file (default: stdin)

       --format-in FORMAT
              Multiple  sequence  alignment  format:  (clustal, fasta, plain, msf, genbank, nbrf, nexus, phylip,
              stockholm, intelligenetics, table, array)

       -o--fout FILENAME
              Output file (default: stdout)

       -F--format-out FORMAT
              Multiple sequence alignment output format: (clustal, fasta, plain, intelligenetics, table,  array)
              (Default: fasta)

              Transformations:

       --seg  Mask low complexity regions in protein sequences.

       --subsample FRACTION
              Return a random subsample of the sequences.

       --reverse
              reverse sequences

       --complement
              complement DNA sequences

transformseq 1.0.0                                November 2024                                  TRANSFORMSEQ(1)

transformseq [options]  <sequence_data.fa>sequence_logo.eps