truspades - truSPAdes genome assembler
Contents
Description
truspades is the main executable for the truSPAdes software. It assembles genomic reads given to it and
places the resulting assembly in <output_dir>.
Name
truspades - truSPAdes genome assembler
Options
Basicoptions-o <output_dir>
directory to store all the resulting files (required)
--test
runs truSPAdes on toy dataset
-h/--help
prints this usage message
-t/--threads <int>
number of threads
--continue
continue interrupted launch
--construct-dataset
parse dataset from input folder
Inputoptions--input-dir <directory>
directory with input data. Note that the directory should contain only files with reads. This option
can be used several times to provide several input directories.
--dataset <file>:w: file with dataset description
TRUSPADES(1)
Synopsis
truspades [options] -o <output_dir>
