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vcfannotategenotypes

Authors

       Erik Garrison and vcflib contributors.

vcfannotategenotypes (vcflib)                                                            VCFANNOTATEGENOTYPES(1)

Description

       Examine  genotype  correspondence.   Annotate  genotypes  in  the first file with genotypes in the second
       adding the genotype as another flag to each sample filed in the first file.  annotation-tag is  the  name
       of  the  sample  flag  which  is added to store the annotation.  also adds a `has_variant' flag for sites
       where the second file has a variant.

Exit Values

0      Success

       not0  Failure

License

       Copyright 2011-2024 (C) Erik Garrison and vcflib contributors.  MIT licensed.   Copyright  2020-2024  (C)
       Pjotr Prins.

Name

vcfannotategenotypes

Options

              Type: transformation

Other

See Also

vcflib(1)

Synopsis

vcfannotategenotypes

See Also