vcfcleancomplex

Authors

       Erik Garrison and vcflib contributors.

vcfcleancomplex (vcflib)                                                                      VCFCLEANCOMPLEX(1)

Description

       Removes  reference-matching  sequence  from  complex  alleles  and  adjusts records to reflect positional
       change.

Exit Values

0      Success

       not0  Failure

License

       Copyright 2011-2024 (C) Erik Garrison and vcflib contributors.  MIT licensed.   Copyright  2020-2024  (C)
       Pjotr Prins.

Name

vcfcleancomplex

Options

              Generate a VCF stream in which 'long' non-complexalleles have their position corrected.
              assumes that VCF records can't overlap 5'->3'

              Type: transformation