vcfevenregions

       Erik Garrison and vcflib contributors.

vcfevenregions (vcflib)                                                                        VCFEVENREGIONS(1)

       Generates  a list of regions, e.g. chr20:10..30 using the variant density information provided in the VCF
       file to ensure that the regions have even numbers of variants.  This can be use to reduce the variance in
       runtime when dividing variant detection or genotyping by genomic coordinates.

0      Success

       not0  Failure

       Copyright 2011-2024 (C) Erik Garrison and vcflib contributors.  MIT licensed.   Copyright  2020-2024  (C)
       Pjotr Prins.

vcfevenregions

              options:
                  -f, --fasta-reference REF    FASTA reference file to use to obtain primer sequences.
                  -n, --number-of-regions N    The number of desired regions.
                  -p, --number-of-positions N  The number of positions per region.
                  -o, --offset N               Add an offset to region positioning, to avoid boundary
                                               related artifacts in downstream processing.
                  -l, --overlap N              The number of sites to overlap between regions.  Default 0.
                  -s, --separator SEQ          Specify string to use to separate region output.  Default '-'

              Type: transformation

vcflib(1)

vcfevenregions options