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vcfinfosummarize

Authors

       Erik Garrison and vcflib contributors.

vcfinfosummarize (vcflib)                                                                    VCFINFOSUMMARIZE(1)

Description

       Take  annotations  given in the per-sample fields and add the mean, median, min, or max to the site-level
       INFO.

Exit Values

0      Success

       not0  Failure

License

       Copyright 2011-2024 (C) Erik Garrison and vcflib contributors.  MIT licensed.   Copyright  2020-2024  (C)
       Pjotr Prins.

Name

vcfinfosummarize

Options

              options:
                  -f, --field         Summarize this field in the INFO column
                  -i, --info          Store the computed statistic in this info field
                  -a, --average       Take the mean for field (default)
                  -m, --median        Use the median
                  -n, --min           Use the min
                  -x, --max           Use the max
                  -h, --help          Print this message
                  -v, --version       Print version

Other

See Also

vcflib(1)

Synopsis

vcfinfosummarize options

See Also