rgfa-findcrisprs - find CRISPRs in assembly graphs
Contents
Bugs
Please report bugs to the RGFA issue tracker: https://github.com/ggonnella/rgfa/issues
RGFA-FINDCRISPRS(1)
Description
Finds CRISPRs given in assembly graphs specified by a GFA file. CRISPRs have a structure ARU1RU..RUnRB
where |U|~|R| in [24..50].
Name
rgfa-findcrisprs - find CRISPRs in assembly graphs
See Also
gfadiff(1), rgfa-mergelinear(1), rgfa-simdebruijn(1)
Synopsis
rgfa-findcrisprs <gfa>
