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rgfa-findcrisprs - find CRISPRs in assembly graphs

Bugs

       Please report bugs to the RGFA issue tracker: https://github.com/ggonnella/rgfa/issues

                                                                                             RGFA-FINDCRISPRS(1)

Description

       Finds CRISPRs given in assembly graphs specified by a GFA file. CRISPRs have a structure ARU1RU..RUnRB
       where |U|~|R| in [24..50].

Name

       rgfa-findcrisprs - find CRISPRs in assembly graphs

See Also

gfadiff(1), rgfa-mergelinear(1), rgfa-simdebruijn(1)

Synopsis

rgfa-findcrisprs <gfa>

See Also