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blast_top_hits - reduces a blast or blat output file to the top hit for each query sequence only

Author

       This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage
       of the program.

blast_top_hits 1.1.2                               March 2017                                  BLAST_TOP_HITS(1)

Description

       Reduces a blast or blat output file to the top hit for each query sequence only.

       This program belongs to seer(1) (Sequence Element (kmer) Enrichment Analysis).

Name

       blast_top_hits - reduces a blast or blat output file to the top hit for each query sequence only

Options

Required--input
              BLAST output file in -m 6/-outfmt 6 or BLAT .psl file

       --mode Either blast or blat

   Optional--full_query
              The entire query must be reported as a match to appear in the output

       -h, --help
              Shows this help.

Synopsis

blast_top_hits--inputblast_out--modeblast<options>

See Also