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haarz - Heuristic mapping of short sequences

Author

       This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage
       of the program.

haarz 0.3                                         October 2018                                          HAARZ(1)

Bugs

       Please report bugs to steve@bioinf.uni-leipzig.de

Description

       The program haarz belongs to the segemehl package.

Name

       haarz - Heuristic mapping of short sequences

Options

availableprograms
       callmethyl
              generate methylation vcf from bam

       methylstring
              get SAM file with methylation string annotation

       split  summarize and annotate segemehl split info

References

              2008 Bioinformatik Leipzig

              2018 Leibniz Institute on Aging (FLI)

Synopsis

haarz <program>

See Also