libscanout - Reads a DHF file and writes a file of top-scoring Classes, Folds and Superfamilies.

DebianMedPackagingTeam <debian-med-packaging@lists.alioth.debian.org>
           Wrote the script used to autogenerate this manual page.

       Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to
       the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

       This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be
       redistributed under the same terms as EMBOSS itself.

DOMAINATRIX 0.1.0+20100721                         08/11/2010                                     LIBSCANOUT(1e)

libscanout is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”).
       It is part of the "Protein:3D Structure" command group(s).

       libscanout - Reads a DHF file and writes a file of top-scoring Classes, Folds and Superfamilies.

Inputsection-dhfinfileinfile
           This option specifies the location of the DHF file (domain hits file) (input). A 'domain hits file'
           contains database hits (sequences) with domain classification information, in FASTA or EMBL formats.
           The hits are relatives to a SCOP or CATH family and are found from a search of a sequence database.
           Files containing hits retrieved by PSIBLAST are generated by using SEQSEARCH.

   RequiredsectionOutputsection-outfileoutfile
           This option specifies the location of the summary file (output). The summary file contains lists of
           domain Classes, Superfamilies and Families rank-ordered on the basis of score (highest-scoring
           first).

       libscanout is fully documented via the tfm(1) system.

libscanout-dhfinfileinfile-outfileoutfilelibscanout-help