notseq - Write to file a subset of an input stream of sequences

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EMBOSS 6.4.0                                       05/11/2012                                         NOTSEQ(1e)

notseq is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It
       is part of the "Edit" command group(s).

       notseq - Write to file a subset of an input stream of sequences

Inputsection-sequenceseqallRequiredsection-excludestring
           Enter a list of sequence names or accession numbers to exclude from the sequences read in. The
           excluded sequences will be written to the file specified in the 'junkout' parameter. The remainder
           will be written out to the file specified in the 'outseq' parameter. The list of sequence names can
           be separated by either spaces or commas. The sequence names can be wildcarded. The sequence names are
           case independent. An example of a list of sequences to be excluded is: myseq, hs*, one two three a
           file containing a list of sequence names can be specified by giving the file name preceded by a '@',
           eg: '@names.dat'

   Outputsection-outseqseqoutall-junkoutseqseqoutall
           This file collects the sequences which you have excluded from the main output file of sequences.
           Default value: /dev/null

       notseq is fully documented via the tfm(1) system.

notseq-sequenceseqall-excludestring-outseqseqoutall [-junkoutseqseqoutall]

       notseq-help