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R_mds - project distance matrix into lower number of dimensions

Author

       This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage
       of the program.

R_mds 1.1.2                                        March 2017                                           R_MDS(1)

Description

       Projects distance matrix into lower number of dimensions Requires R and rhdf5 to be installed, see github
       wiki for more details

Name

       R_mds - project distance matrix into lower number of dimensions

Options

Required-d, --dist
              Distance matrix output by kmds

       -p, --pheno
              Phenotype file used by seer

   Optional-o, --output
              Output prefix (default 'all_structure')

       --pc   Number of dimensions to project into (default 3)

       -R     R executable (default 'which R')

       -h, --help
              Displays this message

Synopsis

R_mds-k<filtered_kmers.txt>-p<pheno_file>

See Also