ProcessingFlags-strict
Remove HTML and MathML tags.
-mixed Allow mixed content XML.
DataSource-inputfilename
Read XML from file instead of standard input.
LocalRecordCache-archivearchiveindicesincrement
Base path for saving individual XML files, plus paths for first- and second-level inverted index
caches.
-deletearchiveindicesincrement
Same paths as -archive, for deleting inverted caches.
-indexelement
Use [parent/element@attribute^version] for identifier.
-fetchdirectory
Base path for retrieving XML files.
-streamdirectory
Path for retrieving compressed XML files (left compressed).
-flagstrict|mixed|none
Alternative syntax for specifying the corresponding options.
-gzip Use compression for local XML files.
-hash Print UIDs and checksum values to standard output.
-trie [type]
Print archive (default), indices, increment, or posting[s] file path.
-padz Pad PMIDs with leading zeros to eight characters.
LocalRecordIndex-e2index [extras]
Create Entrez index XML. extras (true or false; false by default) indicates whether to index
extra fields.
-e2invertarchive
Combined -e2index and -invert in archive.
-join Collect subsets of inverted index files.
-fuse Combine subsets of inverted index files.
-mergedirectoryfield
Combine inverted indices, dividing by term prefix.
-promotedirectoryfield
Create term lists and posting files.
-pathdirectory
Path to postings directory.
-queryquery
Search on words or phrases in Boolean formulas.
-exactquery
Strict search for article round-tripping.
-titlequery
Exact search limited to indexed title field.
-countquery
Print terms and counts, merging wildcards.
-countsquery
Expand wildcards; print individual term counts.
Documentation-help Print usage information and some example argument combinations.
-version
Print version number.