restover - Find restriction enzymes producing a specific overhang
Contents
Bugs
Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to
the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).
Copyright
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be
redistributed under the same terms as EMBOSS itself.
EMBOSS 6.4.0 05/11/2012 RESTOVER(1e)
Description
restover is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It
is part of the "Nucleic:Restriction" command group(s).
Name
restover - Find restriction enzymes producing a specific overhang
Options
Inputsection-sequenceseqall-datafiledatafile-mfiledatafile
Default value: Emethylsites.dat
Requiredsection-seqcompstringAdvancedsection-mininteger
Default value: 1
-maxinteger
Default value: 2000000000
-singleboolean
Default value: N
-threeprimeboolean
Default value: N
-bluntboolean
Default value: Y
-stickyboolean
Default value: Y
-ambiguityboolean
Default value: Y
-plasmidboolean
Default value: N
-methylationboolean
If this is set then RE recognition sites will not match methylated bases. Default value: N
-commercialboolean
Default value: Y
Outputsection-htmlboolean
Default value: N
-limitboolean
Default value: Y
-alphabeticboolean
Default value: N
-fragmentsboolean
Default value: N
-outfileoutfileSee Also
restover is fully documented via the tfm(1) system.
Synopsis
restover-sequenceseqall-datafiledatafile-mfiledatafile-seqcompstring-mininteger-maxinteger-singleboolean-threeprimeboolean-bluntboolean-stickyboolean-ambiguityboolean-plasmidboolean-methylationboolean-commercialboolean-htmlboolean-limitboolean-alphabeticboolean-fragmentsboolean-outfileoutfilerestover-help
