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showdb - Displays information on configured databases

Author

DebianMedPackagingTeam <debian-med-packaging@lists.alioth.debian.org>
           Wrote the script used to autogenerate this manual page.

Bugs

       Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to
       the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

Description

showdb is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It
       is part of the "Data resources" command group(s).

Name

       showdb - Displays information on configured databases

Options

Inputsection-databasestringAdditionalsection-htmlboolean
           Default value: N

       -proteinboolean
           Default value: Y

       -nucleicboolean
           Default value: Y

       -sequenceboolean
           Default value: Y

       -featureboolean
           Default value: Y

       -textboolean
           Default value: Y

       -taxonomyboolean
           Default value: Y

       -resourceboolean
           Default value: Y

       -assemblyboolean
           Default value: Y

       -oboboolean
           Default value: Y

       -fullboolean
           Default value: N

       -methodsboolean
           This displays the access methods that can be used on this database, for all, query or ID access
           Default value: $(full)

       -fieldsboolean
           This displays the search fields that can be used on this database, other than the standard 'id' or
           'acc' fields. Default value: $(full)

       -definedboolean
           This displays a short name for the file containing the database definition Default value: $(full)

       -releaseboolean
           Default value: $(full)

   Advancedsection-onlytoggle
           This is a way of shortening the command line if you only want a few standard columns to be displayed.
           Instead of specifying: '-nohead -notype -noid -noquery -noall' to get only the comment output, you
           can specify '-only -comment' Default value: N

       -headingboolean
           Default value: @(!$(only))

       -typeboolean
           Default value: @(!$(only))

       -idboolean
           Default value: @(!$(only))

       -queryboolean
           Default value: @(!$(only))

       -allboolean
           Default value: @(!$(only))

       -commentboolean
           Default value: @(!$(only))

   Outputsection-outfileoutfile
           Default value: stdout

See Also

       showdb is fully documented via the tfm(1) system.

Synopsis

showdb [-databasestring] [-htmlboolean] [-proteinboolean] [-nucleicboolean] [-sequenceboolean]
              [-featureboolean] [-textboolean] [-taxonomyboolean] [-resourceboolean] [-assemblyboolean]
              [-oboboolean] [-fullboolean] [-methodsboolean] [-fieldsboolean] [-definedboolean]
              [-releaseboolean] -onlytoggle-headingboolean-typeboolean-idboolean-queryboolean-allboolean-commentboolean [-outfileoutfile]

       showdb-help

See Also