debruijn - de Bruijn sequence generator
Contents
Description
debruijn generates (on standard output) a string over the specified alphabet containing every possible
word (substring) of the specified length exactly once. Note: Substrings are not taken to wrap around, so
the first k-1 characters repeat at the end.
Name
debruijn - de Bruijn sequence generator
Options
A summary of options is included below.
- Print usage message.
-astr Alphabet (supply ncbistdaa or ncbi2na for standard alphabets, or supply your own alphabet).
-nk Word size.
Synopsis
debruijn [-] -astr-nk
