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debruijn - de Bruijn sequence generator

Author

       The National Center for Biotechnology Information.

NCBI                                               2004-02-07                                        DEBRUIJN(1)

Description

debruijn  generates  (on  standard output) a string over the specified alphabet containing every possible
       word (substring) of the specified length exactly once.  Note: Substrings are not taken to wrap around, so
       the first k-1 characters repeat at the end.

Name

       debruijn - de Bruijn sequence generator

Options

       A summary of options is included below.

       -      Print usage message.

       -astr Alphabet (supply ncbistdaa or ncbi2na for standard alphabets, or supply your own alphabet).

       -nk   Word size.

Synopsis

debruijn [-] -astr-nk

See Also