rearrange.pl -- rearrange an anchors file according to some rules

       rearrange.pl -- rearrange an anchors file according to some rules

       --output - force output to go to some particular file (otherwise it's automatically derived from the
       input filenames)

perl v5.40.0                                       2024-11-30                                       REARRANGE(1)

       rearrange.pl <input anchors> <permutation> eg.  rearrange.pl myalign.anchors 2 3 1 4