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gt-sequniq - Filter out repeated sequences in given sequence files.

Description

-rev [yes|no]
           also filter out sequences whose reverse complement is identical to a sequence already output
           (default: no)

       -v [yes|no]
           be verbose (default: no)

       -width [value]
           set output width for FASTA sequence printing (0 disables formatting) (default: 0)

       -o [filename]
           redirect output to specified file (default: undefined)

       -gzip [yes|no]
           write gzip compressed output file (default: no)

       -bzip2 [yes|no]
           write bzip2 compressed output file (default: no)

       -force [yes|no]
           force writing to output file (default: no)

       -help
           display help and exit

       -version
           display version information and exit

       The tool will only remove identical duplicates of sequences, not substrings contained within other
       sequences.

Name

       gt-sequniq - Filter out repeated sequences in given sequence files.

Reporting Bugs

       Report bugs to https://github.com/genometools/genometools/issues.

GenomeTools 1.6.5                                  04/27/2024                                      GT-SEQUNIQ(1)

Synopsis

gtsequniq [option ...] sequence_file [...]

See Also