showorf - Display a nucleotide sequence and translation in pretty format
Contents
Bugs
Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to
the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).
Copyright
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be
redistributed under the same terms as EMBOSS itself.
EMBOSS 6.4.0 05/11/2012 SHOWORF(1e)
Description
showorf is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It
is part of the "Nucleic:Gene finding,Nucleic:Translation" command group(s).
Name
showorf - Display a nucleotide sequence and translation in pretty format
Options
Inputsection-sequencesequenceRequiredsection-frameslist
Default value: 1,2,3,4,5,6
Additionalsection-tablelistOutputsection-outfileoutfile-rulerboolean
Default value: Y
-plabelboolean
Default value: Y
-nlabelboolean
Default value: Y
-widthinteger
Default value: 50
See Also
showorf is fully documented via the tfm(1) system.
Synopsis
showorf-sequencesequence-frameslist [-tablelist] -outfileoutfile [-rulerboolean] [-plabelboolean]
[-nlabelboolean] -widthintegershoworf-help