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Bio::Tradis::CombinePlots - Combine multiple plotfiles and generate updated statistics for the combined

Author

       Carla Cummins <path-help@sanger.ac.uk>

Name

       Bio::Tradis::CombinePlots - Combine multiple plotfiles and generate updated statistics for the combined
       files

Synopsis

       Takes a tab-delimited file with an ID as the first column followed by a list of plotfiles to combine per
       row. The ID will be used to name the new plotfile and as an identifier in the stats file, so ensure these
       are unique.

       For example, an input file named plots_to_combine.txt:

           tradis1 plot1.1.gz  plot1.2.gz plot1.3.gz
           tradis2 plot2.1.gz  plot2.2.gz
           tradis3 plot3.1.gz  plot3.2.gz plot3.3.gz   plot3.4.gz

       will produce

           1. a directory named combined with 3 files - tradis1.insertion_site_plot.gz,
           tradis2.insertion_site_plot.gz, tradis3.insertion_site_plot.gz 2. a stats file named
           plots_to_combine.stats

Usage

          use Bio::Tradis::CombinePlots;

          my $pipeline = Bio::Tradis::CombinePlots->new(plotfile => 'abc');
          $pipeline->combine;

Version

       version 1.4.5

See Also