Bio::Tradis::CombinePlots - Combine multiple plotfiles and generate updated statistics for the combined
Contents
Copyright And License
This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.
This is free software, licensed under:
The GNU General Public License, Version 3, June 2007
perl v5.38.2 2024-01-25 Bio::Tradis::CombinePlots(3pm)
Name
Bio::Tradis::CombinePlots - Combine multiple plotfiles and generate updated statistics for the combined
files
Synopsis
Takes a tab-delimited file with an ID as the first column followed by a list of plotfiles to combine per
row. The ID will be used to name the new plotfile and as an identifier in the stats file, so ensure these
are unique.
For example, an input file named plots_to_combine.txt:
tradis1 plot1.1.gz plot1.2.gz plot1.3.gz
tradis2 plot2.1.gz plot2.2.gz
tradis3 plot3.1.gz plot3.2.gz plot3.3.gz plot3.4.gz
will produce
1. a directory named combined with 3 files - tradis1.insertion_site_plot.gz,
tradis2.insertion_site_plot.gz, tradis3.insertion_site_plot.gz 2. a stats file named
plots_to_combine.stats
Usage
use Bio::Tradis::CombinePlots;
my $pipeline = Bio::Tradis::CombinePlots->new(plotfile => 'abc');
$pipeline->combine;
Version
version 1.4.5
