Bio::Tradis::CommandLine::PlotCombine - Combine multiple plotfiles and generate updated statistics for

Author

       Carla Cummins <path-help@sanger.ac.uk>

Copyright And License

       This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

       This is free software, licensed under:

         The GNU General Public License, Version 3, June 2007

perl v5.38.2                                       2024-01-25              Bio::Tradis::C...ne::PlotCombine(3pm)

Name

       Bio::Tradis::CommandLine::PlotCombine - Combine multiple plotfiles and generate updated statistics for
       the combined files

Synopsis

       Takes a tab-delimited file with an ID as the first column followed by a list of plotfiles to combine per
       row. The ID will be used to name the new plotfile and as an identifier in the stats file, so ensure these
       are unique.

       For example, an input file named plots_to_combine.txt:

          tradis1      plot1.1.gz      plot1.2.gz plot1.3.gz
          tradis2 plot2.1.gz   plot2.2.gz
          tradis3      plot3.1.gz      plot3.2.gz plot3.3.gz   plot3.4.gz

       will produce:

       1. a directory named combined with 3 files - tradis1.insertion_site_plot.gz,
       tradis2.insertion_site_plot.gz, tradis3.insertion_site_plot.gz
       2. a stats file named plots_to_combine.stats