Bio::Roary::External::Blastp - Wrapper around NCBIs blastp command
Contents
Copyright And License
This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.
This is free software, licensed under:
The GNU General Public License, Version 3, June 2007
perl v5.40.0 2024-12-02 Bio::Roary::External::Blastp(3pm)
Methods
result_file
Returns the path to the results file
Name
Bio::Roary::External::Blastp - Wrapper around NCBIs blastp command
Synopsis
Wrapper around NCBIs blastp command
use Bio::Roary::External::Blastp;
my $blast_database= Bio::Roary::External::Blastp->new(
fasta_file => 'contigs.fa',
blast_database => 'db',
exec => 'blastp',
output_file => 'results.out'
);
$blast_database->run();
Version
version 3.13.0
