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gthfilestat - show statistics about consensus spliced alignments

Description

       Show statistics about spliced alignments in GenomeThreader output files containing intermediate results.

Name

       gthfilestat - show statistics about consensus spliced alignments

Options

-minalignmentscore
           set the minimum alignment score for spliced alignments to be included into the set of spliced
           alignments default: 0.00

       -maxalignmentscore
           set the maximum alignment score for spliced alignments to be included into the set of spliced
           alignments default: 1.00

       -mincoverage
           set the minimum coverage for spliced alignments to be included into the set of spliced alignments
           default: 0.00

       -maxcoverage
           set the maximum coverage for spliced alignments to be included into the set of spliced alignments
           default: 9999.99

       -v
           be verbose default: no

       -help
           display help and exit

       -version
           display version information and exit

                                                                                                  GTHFILESTAT(1)

Synopsis

gthfilestat [option ...] [file ...]

See Also