logo
Free, unlimited AI code reviews that run on commit
git-lrc git-lrc GitHub Install Now We'd appreciate a star git-lrc - Free, unlimited AI code reviews that run on commit | Product Hunt git-lrc - Free, unlimited AI code reviews that run on commit | Product Hunt

info_on_seqs - perform final step of SIFT prediction

Author

       Pauline Ng

Description

       You should use SIFT_for_submitting_fasta_seq.csh instead of this program unless you know what you are
       doing.

       This program prepares the final SIFT prediction.  In addition to the command line arguments, it expects
       certain files present nextto the FASTA_FILE.

Name

       info_on_seqs - perform final step of SIFT prediction

Options

       <FASTA_FILE>
           Protein sequence in fasta format.

       <SUBSTITUTIONS_FILE>
           File of substitutions to be predicted.  See /usr/share/doc/sift/examples/lacI.subst for an example of
           the format.  If you give '-', scores for all mutations of the entire protein sequence are printed.

       <OUTPUT>
           Output file.

See Also

       SIFT_for_submitting_fasta_seq.csh

4.0.3b                                             2017-12-05                                    INFO_ON_SEQS(1)

Synopsis

       info_on_seqs <FASTA_FILE> <SUBSTITUTIONS_FILE> <OUTPUT>

See Also