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vsubseqselect - print selected subsequences from index

Description

       The program vseqselect selects subsequences from a given index and prints them on standard output, either
       line by line or in FASTA format. The selection can either be random or according to position ranges
       specified by the user.

       Please refer to the manual for more detailed explanations.

Name

       vsubseqselect - print selected subsequences from index

Options

-minlength
           Specify the minimal length of the substrings to be selected.

       -maxlength <length>
           Specify the maximal length of the substrings to be selected.

       -snum <n>
           Specify the number of random substrings to be selected.

       -range <pos> <pos>
           Specify the first and last position of the substring to be selected.

       -seq <length> <number> <pos>
           Specify length, number, and relative position of the substring to be selected.

       -version
           Show the version of the Vmatch package

       -help
           Show help.

                                                                                                VSUBSEQSELECT(1)

Synopsis

vsubseqselect [options] indexname

See Also