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Authors

       Erik Garrison and vcflib contributors.

vcfannotate (vcflib)                                                                              VCFANNOTATE(1)

Description

       Intersect the records in the VCF file with targets provided in a BED file.  Intersections are done on the
       reference sequences in the VCF file.  If no VCF filename is specified on the command line (last argument)
       the VCF read from stdin.

Exit Values

0      Success

       not0  Failure

License

       Copyright  2011-2024  (C)  Erik Garrison and vcflib contributors.  MIT licensed.  Copyright 2020-2024 (C)
       Pjotr Prins.

Name

vcfannotate

Options

              options:
                  -b, --bed   use annotations provided by this BED file
                  -k, --key   use this INFO field key for the annotations
                  -d, --default  use this INFO field key for records without annotations

              Type: transformation

Other

See Also

vcflib(1)

Synopsis

vcfannotate options []

See Also