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simkaMinCore - comparative metagenomics method dedicated to NGS datasets

Author

       This  manpage was written by Shayan Doust for the Debian distribution and can be used for any other usage
       of the program.

simkaMinCore 1.5.1                               September 2019                                  SIMKAMINCORE(1)

Description

       [Distance computation options]

       sketch : transform datasets in small sketches of k-mers and their abundance

       distance
              : compute Jaccard and Bray-Curtis distances between sketches

       [Distance matrix manipulation options]

       export : export distance matrices stored in binary format

       [Sketch options]

       append : merge multiple sketch files into a single one

       info   : list datasets contained in a sketch file

Name

       simkaMinCore - comparative metagenomics method dedicated to NGS datasets

Synopsis

simkaMin [option]

See Also