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simpal -- proof of concept

Name

       simpal -- proof of concept

Options

        Set options by something like --tolerance=5 or -t 5 or whatever.
       maxLoop -- specifies max separation for the ends of the palindromes
       maxDistance -- specifies the maximum difference in palindrome length
                      when comparing palindromes
       tolerance -- max permissible misses in palindromes between sequences

       Setting either to -1 means no limit

       seedlength -- length of seeds to use for finding palindromes

perl v5.40.0                                       2024-11-30                                          SIMPAL(1)

Synopsis

       simpal.pl [options] <ref seq> <target seq> [target2 target3 ...]

See Also