Bioinformatics sequences Man Pages

Browse Bioinformatics sequences manual pages with detailed documentation.

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Man Pages in Bioinformatics sequences

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$0 - Bulk loads gff3 files into a chado database.

PLINK - whole genome SNP analysis

PLINK - whole genome SNP analysis

QTLtools quan - Quantify gene and exon expression from RN...

RNAplot - manual page for RNAplot 2.6.4

RNAup - manual page for RNAup 2.6.4

augur - pipeline components for real-time virus analysis

bcftools - utilities for variant calling and manipulating...

blixem - display multiple alignments against a reference ...

blixemh - display multiple alignments against a reference...

cmscan - search sequence(s) against a covariance model da...

diamond - accelerated BLAST compatible local sequence ali...

fastANI - Fast alignment-free computation of whole-genome...

fastf3, fastf3_t - compare a mixed peptide sequence a...

fasts3, fasts3_t - compare several short peptide seque...

freecontact - fast protein contact predictor

gff2aplot - Converting GFF files for pairwise alignments ...

grinder - Versatile omics shotgun and amplicon sequencing...

hhalign - align a query alignment/HMM to a template align...

hhsearch - search a database of HMMs with a query alignme...

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