tree_recon - Tree reconstruction

       For questions or comments, contact:
              Tobias Rausch <rausch@embl.de>

       SeqAn Homepage:
              http://www.seqan.de

tree_recon 1.4.8 [tarball]                                                                         TREE_RECON(1)

       Reconstruct phylogenetic tree from Phylip matrix IN.DIST.

       tree_recon - Tree reconstruction

-h, --help
              Display the help message.

       --version
              Display version information.

   Input/Output:-m, --matrixINPUT_FILE
              Name Phylip distance matrix file.  Must contain at least three species. Valid filetype is: .dist.

       -o, --out-fileOUTPUT_FILE
              Path to write output to. Valid filetypes are: .newick and .dot. Default: tree.dot.

   AlgorithmOptions:-b, --buildSTRING
              Tree  building  method.  nj:  neighbour-joining,  min:  UPGMA  single linkage, max: UPGMA complete
              linkage, avg: UPGMA average linkage, wavg:  UPGMA  weighted  average  linkage.   Neighbour-joining
              creates  an  unrooted tree.  We root that tree at the least joined pair. One of nj, min, max, avg,
              and wavg. Default: nj.

tree_recon [OPTIONS] -mIN.DIST